Basic information
Locus name	AT5G07990
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation:flavonoid biosynthesis
Effect for Senescence	Unclear
Gene Description	Flavonoid 3-hydroxylase (F3H).Upregulated in senescent leaves
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process oxidation-reduction process molecular function electron carrier activity heme binding iron ion binding oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Pathway	Reactome REACT_13433
Sequence	AT5G07990.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_133031	Accession Taxon NP_171635 Arabidopsis thaliana NP_196416 ( AT5G07990 ) Arabidopsis thaliana NP_001060927 Oryza sativa Japonica Group NP_001064333 Oryza sativa Japonica Group NP_001064338 Oryza sativa Japonica Group estExt_Genewise1.C_2000006 Physcomitrella patens subsp. patens estExt_Genewise1.C_220019 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_2000390 Physcomitrella patens subsp. patens 29742.m001406 Ricinus communis 30138.m003983 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24298 8.5E-127 1 508 No hit NA Pfam PF00067 1.4E-104 34 487 IPR001128 Cytochrome P450 SUPERFAMILY SSF48264 2.0E-129 34 502 IPR001128 Cytochrome P450 PRINTS PR00463 2.7E-45 61 80 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.7E-45 85 106 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.7E-45 291 308 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.6E-10 302 319 IPR001128 Cytochrome P450 PRINTS PR00463 2.7E-45 311 337 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.7E-45 354 372 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.6E-10 355 366 IPR001128 Cytochrome P450 PRINTS PR00463 2.7E-45 395 419 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 2.7E-45 435 445 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 1.6E-10 436 445 IPR001128 Cytochrome P450 ProSitePatterns PS00086 NA 438 447 IPR017972 Cytochrome P450, conserved site PRINTS PR00463 2.7E-45 445 468 IPR002401 Cytochrome P450, E-class, group I
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787