Basic information
Locus name	AT5G39520
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G39520.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_144996	Accession Taxon NP_198768 ( AT5G39520 ) Arabidopsis thaliana NP_198769 Arabidopsis thaliana ACO64203 Micromonas sp. RCC299 NP_001049089 Oryza sativa Japonica Group NP_001060370 Oryza sativa Japonica Group 1300010126 Ostreococcus tauri estExt_fgenesh1_pg.C_1730036 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_3550036 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_209000012 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_209000013 Physcomitrella patens subsp. patens 29635.m000453 Ricinus communis fgenesh1_pg.C_chr_4000850 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF09366 3.6E-57 39 225 IPR018971 Protein of unknown function DUF1997