Basic information
Locus name	AT5G19590
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G19590.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G19590.1  miRNA: ath-miR854a miRNA: ath-miR854a mfe: -41.9 kcal/mol  p-value: 0.000059  position: 50  target 5' U                    C  3'             UCCUCCUCUCUAUCCUCAUU                 AGGAGGAGGGAUAGGAGUAG      miRNA  3' G                       5'  target: AT5G19590.1  miRNA: ath-miR854b miRNA: ath-miR854b mfe: -41.9 kcal/mol  p-value: 0.000019  position: 50  target 5' U                    C  3'             UCCUCCUCUCUAUCCUCAUU                 AGGAGGAGGGAUAGGAGUAG      miRNA  3' G                       5'  target: AT5G19590.1  miRNA: ath-miR854c miRNA: ath-miR854c mfe: -41.9 kcal/mol  p-value: 0.000014  position: 50  target 5' U                    C  3'             UCCUCCUCUCUAUCCUCAUU                 AGGAGGAGGGAUAGGAGUAG      miRNA  3' G                       5'  target: AT5G19590.1  miRNA: ath-miR854d miRNA: ath-miR854d mfe: -41.9 kcal/mol  p-value: 0.000044  position: 50  target 5' U                    C  3'             UCCUCCUCUCUAUCCUCAUU                 AGGAGGAGGGAUAGGAGUAG      miRNA  3' G                       5'  target: AT5G19590.1  miRNA: ath-miR854e miRNA: ath-miR854e mfe: -41.9 kcal/mol  p-value: 0.000007  position: 50  target 5' U                    C  3'             UCCUCCUCUCUAUCCUCAUU                 AGGAGGAGGGAUAGGAGUAG      miRNA  3' G                       5'
Ortholog Group
Ortholog Groups: OG5_170705	Accession Taxon NP_197460 ( AT5G19590 ) Arabidopsis thaliana NP_001043469 Oryza sativa Japonica Group NP_001055581 Oryza sativa Japonica Group estExt_gwp_gw1.C_100182 Physcomitrella patens subsp. patens 29848.m004696 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF141562 4.6E-35 4 145 IPR007493 Protein of unknown function DUF538 Pfam PF04398 6.7E-27 31 141 IPR007493 Protein of unknown function DUF538