Basic information
Locus name	AT3G60590
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT3G60590.1 | Genomic | mRNA | CDS | Protein AT3G60590.2 | Genomic | mRNA | CDS | Protein AT3G60590.3 | Genomic | mRNA | CDS | Protein AT3G60590.4 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G60590.1  miRNA: ath-miR413 miRNA: ath-miR413 mfe: -30.0 kcal/mol  p-value: 0.001384  position: 212  target 5' A        G        G  G  3'             GUGCAGAG AAGAGAAA UA                 CACGUCUU UUCUCUUU AU      miRNA  3'          G        G  A  5'  target: AT3G60590.2  miRNA: ath-miR413 miRNA: ath-miR413 mfe: -30.0 kcal/mol  p-value: 0.001709  position: 365  target 5' A        G        G  G  3'             GUGCAGAG AAGAGAAA UA                 CACGUCUU UUCUCUUU AU      miRNA  3'          G        G  A  5'  target: AT3G60590.3  miRNA: ath-miR413 miRNA: ath-miR413 mfe: -30.0 kcal/mol  p-value: 0.001634  position: 481  target 5' A        G        G  G  3'             GUGCAGAG AAGAGAAA UA                 CACGUCUU UUCUCUUU AU      miRNA  3'          G        G  A  5'  target: AT3G60590.4  miRNA: ath-miR413 miRNA: ath-miR413 mfe: -30.0 kcal/mol  p-value: 0.001095  position: 216  target 5' A        G        G  G  3'             GUGCAGAG AAGAGAAA UA                 CACGUCUU UUCUCUUU AU      miRNA  3'          G        G  A  5'
Ortholog Group
Ortholog Groups: OG5_164336	Accession Taxon NP_001118866 Arabidopsis thaliana NP_191618 Arabidopsis thaliana NP_850729 Arabidopsis thaliana NP_974468 ( AT3G60590 ) Arabidopsis thaliana NP_001053417 Oryza sativa Japonica Group 30174.m008823 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32485 1.8E-99 85 404 No hit NA
Subcellular Localization
Localization 1 Localization chloroplast Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization mitochondrion Evidence SUBAcon Pubmed ID 23180787
Localization 3 Localization plasma membrane Evidence SUBAcon Pubmed ID 23180787
Localization 4 Localization plastid Evidence SUBAcon Pubmed ID 23180787