Basic information
Locus name	AT5G63640
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	VHS domain-containing protein / GAT domain-containing protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process intracellular protein transport cellular component intracellular
Sequence	AT5G63640.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_176956	Accession Taxon NP_201169 ( AT5G63640 ) Arabidopsis thaliana NP_001060807 Oryza sativa Japonica Group 30225.m001702 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13856 6.5E-117 1 332 No hit NA SMART SM00288 1.9E-28 2 134 IPR018205 VHS subgroup SUPERFAMILY SSF48464 7.0E-34 4 137 IPR008942 ENTH/VHS Pfam PF00790 2.9E-21 5 110 IPR002014 VHS ProSiteProfiles PS50179 33.0 9 138 IPR002014 VHS ProSiteProfiles PS50909 13.6 178 266 IPR004152 GAT Pfam PF03127 6.2E-18 182 269 IPR004152 GAT SUPERFAMILY SSF89009 3.4E-17 182 268 No hit NA Coils Coil NA 244 265 No hit NA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787