Basic information
Locus name	AT2G27580
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	zinc finger (AN1-like) family protein; FUNCTIONS IN: DNA binding, zinc ion binding.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function DNA binding zinc ion binding
Sequence	AT2G27580.1 | Genomic | mRNA | CDS | Protein AT2G27580.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127624	Accession Taxon NP_001077694 Arabidopsis thaliana NP_172706 Arabidopsis thaliana NP_180326 ( AT2G27580 ) Arabidopsis thaliana NP_190848 Arabidopsis thaliana NP_192941 Arabidopsis thaliana NP_194013 Arabidopsis thaliana NP_564585 Arabidopsis thaliana NP_565844 Arabidopsis thaliana NP_849364 Arabidopsis thaliana NP_849652 Arabidopsis thaliana NP_974594 Arabidopsis thaliana CMT430C Cyanidioschyzon merolae strain 10D 195485 Chlamydomonas reinhardtii NP_001044076 Oryza sativa Japonica Group NP_001046186 Oryza sativa Japonica Group NP_001047019 Oryza sativa Japonica Group NP_001051527 Oryza sativa Japonica Group NP_001051528 Oryza sativa Japonica Group NP_001051530 Oryza sativa Japonica Group NP_001058066 Oryza sativa Japonica Group NP_001058985 Oryza sativa Japonica Group e_gw1.50.114.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_2520009 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_230008 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1300111 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1380060 Physcomitrella patens subsp. patens gw1.23.189.1 Physcomitrella patens subsp. patens 29625.m000680 Ricinus communis 29820.m000982 Ricinus communis 30055.m001539 Ricinus communis 30147.m014170 Ricinus communis 30169.m006412 Ricinus communis estExt_fgenesh1_pg.C_chr_70212 Thalassiosira pseudonana CCMP1335 fgenesh1_pg.C_chr_1000779 Thalassiosira pseudonana CCMP1335 XP_002955258 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10634 5.4E-67 3 163 No hit NA ProSiteProfiles PS51036 10.6 7 41 IPR002653 Zinc finger, A20-type Pfam PF01754 1.9E-12 10 34 IPR002653 Zinc finger, A20-type SMART SM00259 2.5E-9 10 34 IPR002653 Zinc finger, A20-type SUPERFAMILY SSF57716 1.9E-13 12 55 No hit NA SUPERFAMILY SSF118310 8.4E-29 90 158 No hit NA ProSiteProfiles PS51039 12.3 101 144 IPR000058 Zinc finger, AN1-type Pfam PF01428 1.0E-11 104 142 IPR000058 Zinc finger, AN1-type SMART SM00154 1.0E-15 104 141 IPR000058 Zinc finger, AN1-type