Basic information
Locus name	AT5G16570
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling:N
Effect for Senescence	Unclear
Gene Description	Glutamine synthetase, putative. Upregulated significantly in senescent leaves.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process glutamine biosynthetic process nitrogen compound metabolic process molecular function glutamate-ammonia ligase activity
Pathway	KEGG map00250 (EC 6.3.1.2) map00330 (EC 6.3.1.2) map00910 (EC 6.3.1.2) MetaCyc PWY-3282
Sequence	AT5G16570.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_127569	Accession Taxon NP_001031969 Arabidopsis thaliana NP_001078639 Arabidopsis thaliana NP_175280 Arabidopsis thaliana NP_176794 Arabidopsis thaliana NP_188409 Arabidopsis thaliana NP_198413 Arabidopsis thaliana NP_198576 Arabidopsis thaliana NP_568335 ( AT5G16570 ) Arabidopsis thaliana CMI233C Cyanidioschyzon merolae strain 10D 129468 Chlamydomonas reinhardtii 133971 Chlamydomonas reinhardtii 136895 Chlamydomonas reinhardtii ACO63243 Micromonas sp. RCC299 NP_001048045 Oryza sativa Japonica Group NP_001049424 Oryza sativa Japonica Group NP_001051067 Oryza sativa Japonica Group NP_001054133 Oryza sativa Japonica Group e_gw1.241.101.1 Physcomitrella patens subsp. patens e_gw1.40.194.1 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_190003 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_190154 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_3450002 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3450001 Physcomitrella patens subsp. patens 29675.m000392 Ricinus communis 29726.m003921 Ricinus communis estExt_fgenesh1_kg.C_chr_220004 Thalassiosira pseudonana CCMP1335 XP_002947417 Volvox carteri f. nagariensis XP_002947554 Volvox carteri f. nagariensis XP_002956198 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR20852 1.2E-181 9 354 No hit NA SUPERFAMILY SSF54368 5.1E-17 12 102 IPR008147 Glutamine synthetase, beta-Grasp Pfam PF03951 1.6E-17 20 97 IPR008147 Glutamine synthetase, beta-Grasp ProSitePatterns PS00180 NA 55 72 IPR027302 Glutamine synthetase, N-terminal conserved site SUPERFAMILY SSF55931 5.7E-68 103 352 No hit NA Pfam PF00120 4.4E-62 104 349 IPR008146 Glutamine synthetase, catalytic domain ProSitePatterns PS00181 NA 237 253 IPR027303 Glutamine synthetase, glycine-rich site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787