Basic information
Locus name	AT4G13100
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT4G13100.1 | Genomic | mRNA | CDS | Protein AT4G13100.2 | Genomic | mRNA | CDS | Protein AT4G13100.3 | Genomic | mRNA | CDS | Protein AT4G13100.4 | Genomic | mRNA | CDS | Protein AT4G13100.5 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_170056	Accession Taxon NP_001030762 Arabidopsis thaliana NP_001078383 Arabidopsis thaliana NP_189139 Arabidopsis thaliana NP_193046 Arabidopsis thaliana NP_849372 ( AT4G13100 ) Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12183 7.0E-29 135 256 No hit NA PANTHER PTHR12183 1.0E-26 136 256 No hit NA SUPERFAMILY SSF57850 3.5E-13 207 252 No hit NA SUPERFAMILY SSF57850 2.7E-13 207 252 No hit NA Pfam PF13920 2.3E-10 208 251 No hit NA Pfam PF13920 2.3E-10 208 251 No hit NA ProSiteProfiles PS50089 10.8 208 246 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 10.8 208 246 IPR001841 Zinc finger, RING-type SMART SM00184 2.4E-5 208 245 IPR001841 Zinc finger, RING-type SMART SM00184 2.4E-5 208 245 IPR001841 Zinc finger, RING-type