Basic information
Locus name	AT1G74890
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:CK
Effect for Senescence	Unclear
Gene Description	Downregulated in senescent leaves. Arabidopsis response regulators type A, ARR15
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process phosphorelay signal transduction system regulation of transcription, DNA-dependent molecular function phosphorelay response regulator activity
Pathway	Reactome REACT_14797
Sequence	AT1G74890.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G74890.1  miRNA: ath-miR854a miRNA: ath-miR854a mfe: -29.3 kcal/mol  p-value: 0.003048  position:  18  target 5' A                 U  U 3'             UCUUCUUCUUUAUCUUC UC              AGGAGGAGGGAUAGGAG AG   miRNA  3' G                 U    5'  target: AT1G74890.1  miRNA: ath-miR854b miRNA: ath-miR854b mfe: -29.3 kcal/mol  p-value: 0.004158  position:  18  target 5' A                 U  U 3'             UCUUCUUCUUUAUCUUC UC              AGGAGGAGGGAUAGGAG AG   miRNA  3' G                 U    5'  target: AT1G74890.1  miRNA: ath-miR854c miRNA: ath-miR854c mfe: -29.3 kcal/mol  p-value: 0.003140  position:  18  target 5' A                 U  U 3'             UCUUCUUCUUUAUCUUC UC              AGGAGGAGGGAUAGGAG AG   miRNA  3' G                 U    5'  target: AT1G74890.1  miRNA: ath-miR854d miRNA: ath-miR854d mfe: -29.3 kcal/mol  p-value: 0.003100  position:  18  target 5' A                 U  U 3'             UCUUCUUCUUUAUCUUC UC              AGGAGGAGGGAUAGGAG AG   miRNA  3' G                 U    5'  target: AT1G74890.1  miRNA: ath-miR854e miRNA: ath-miR854e mfe: -29.3 kcal/mol  p-value: 0.004174  position:  18  target 5' A                 U  U 3'             UCUUCUUCUUUAUCUUC UC              AGGAGGAGGGAUAGGAG AG   miRNA  3' G                 U    5'
Ortholog Group
Ortholog Groups: OG5_137529	Accession Taxon NP_173339 Arabidopsis thaliana NP_177627 ( AT1G74890 ) Arabidopsis thaliana NP_181663 Arabidopsis thaliana NP_190393 Arabidopsis thaliana NP_191263 Arabidopsis thaliana NP_201097 Arabidopsis thaliana NP_001045420 Oryza sativa Japonica Group NP_001065722 Oryza sativa Japonica Group NP_001066118 Oryza sativa Japonica Group gw1.10.157.1 Physcomitrella patens subsp. patens gw1.10.205.1 Physcomitrella patens subsp. patens gw1.12.283.1 Physcomitrella patens subsp. patens gw1.172.59.1 Physcomitrella patens subsp. patens gw1.400.27.1 Physcomitrella patens subsp. patens gw1.62.83.1 Physcomitrella patens subsp. patens gw1.94.31.1 Physcomitrella patens subsp. patens 28094.m000169 Ricinus communis 29736.m002100 Ricinus communis 30147.m014021 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR26402 1.1E-66 1 147 No hit NA SUPERFAMILY SSF52172 8.0E-26 17 147 IPR011006 CheY-like superfamily SMART SM00448 1.1E-18 18 145 IPR001789 Signal transduction response regulator, receiver domain ProSiteProfiles PS50110 25.5 19 146 IPR001789 Signal transduction response regulator, receiver domain Pfam PF00072 2.0E-19 20 138 IPR001789 Signal transduction response regulator, receiver domain
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787