Basic information
Locus name	AT3G12400
Alias	ELC
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:ubiquitin binding
Effect for Senescence	unclear
Gene Description	ELC; FUNCTIONS IN: ubiquitin binding; INVOLVED IN: trichome branching, cell division; LOCATED IN: late endosome, ESCRT I complex, protein complex, early endosome
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cellular protein modification process protein transport
Sequence	AT3G12400.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128950	Accession Taxon NP_196890 Arabidopsis thaliana NP_566423 ( AT3G12400 ) Arabidopsis thaliana CMK136C Cyanidioschyzon merolae strain 10D 195569 Chlamydomonas reinhardtii ACO61715 Micromonas sp. RCC299 NP_001048634 Oryza sativa Japonica Group 0300010028 Ostreococcus tauri estExt_fgenesh1_pg.C_2420047 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_540234 Physcomitrella patens subsp. patens 29686.m000879 Ricinus communis estExt_fgenesh1_pg.C_chr_70683 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23306 1.2E-223 13 397 No hit NA ProSiteProfiles PS51322 51.3 18 162 IPR008883 Ubiquitin E2 variant, N-terminal SUPERFAMILY SSF54495 2.5E-32 18 158 IPR016135 Ubiquitin-conjugating enzyme/RWD-like Pfam PF05743 3.3E-41 38 158 IPR008883 Ubiquitin E2 variant, N-terminal Coils Coil NA 264 292 No hit NA Pfam PF09454 2.0E-24 315 379 IPR017916 Steadiness box ProSiteProfiles PS51312 12.4 322 390 IPR017916 Steadiness box SUPERFAMILY SSF140111 1.2E-19 322 382 No hit NA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787