Basic information   
Locus name AT3G11440
AliasMYB65
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation:MYB
Effect for Senescenceunclear
Gene DescriptionYB DOMAIN PROTEIN 65 (MYB65); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: response to ethylene stimulus, pollen sperm cell differentiation, gibberellic acid mediated signaling, regulation of transcription, response to salicylic acid stimulus
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
SequenceAT3G11440.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT3G11440.1 
miRNA: ath-miR159a
miRNA: ath-miR159a
mfe: -37.7 kcal/mol 
p-value: 0.000343 

position: 1153 
target 5' C              U     U  3' 
           UGGAGCUCCCUUCA UCCAA     
           AUCUCGAGGGAAGU AGGUU     
miRNA  3'                U     U  5' 

target: AT3G11440.1 
miRNA: ath-miR159b
miRNA: ath-miR159b
mfe: -36.9 kcal/mol 
p-value: 0.000392 

position: 1154 
target 5' U             U     U  3' 
           GGAGCUCCCUUCA UCCAA     
           UCUCGAGGGAAGU AGGUU     
miRNA  3' U             U     U  5' 

target: AT3G11440.1 
miRNA: ath-miR159c
miRNA: ath-miR159c
mfe: -39.0 kcal/mol 
p-value: 0.000262 

position: 1154 
target 5' U             U     U  3' 
           GGAGCUCCCUUCA UCCAA     
           CCUCGAGGGAAGU AGGUU     
miRNA  3' U             U     U  5' 
Ortholog Group      
Ortholog Groups: OG5_156358
AccessionTaxon
NP_001078537Arabidopsis thaliana
NP_187751 ( AT3G11440 ) Arabidopsis thaliana
NP_196228Arabidopsis thaliana
NP_850779Arabidopsis thaliana
NP_001044592Oryza sativa Japonica Group
gw1.238.44.1Physcomitrella patens subsp. patens
gw1.66.160.1Physcomitrella patens subsp. patens
29686.m000890Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRSFPIRSF0016930.01553IPR016310Transcription factor, GAMYB
ProSiteProfilesPS5129415.93890IPR017930Myb domain
PANTHERPTHR106419.2E-13041356No hitNA
SMARTSM007171.4E-114292IPR001005SANT/Myb domain
SUPERFAMILYSSF466893.5E-2942137IPR009057Homeodomain-like
PfamPF139211.5E-1446106No hitNA
ProSiteProfilesPS5129425.891145IPR017930Myb domain
SMARTSM007177.3E-1795143IPR001005SANT/Myb domain
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787