Basic information
Locus name	AT3G05545
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:PHD
Effect for Senescence	unclear
Gene Description	transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, DNA binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083), Zinc finger, PHD-type (InterPro:IPR001965)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT3G05545.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_178422	Accession Taxon NP_850517 ( AT3G05545 ) Arabidopsis thaliana NP_001042982 Oryza sativa Japonica Group NP_001054683 Oryza sativa Japonica Group 30128.m008836 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22764 8.6E-116 14 161 No hit NA SUPERFAMILY SSF57850 1.8E-12 30 84 No hit NA Pfam PF13639 3.7E-10 37 83 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 11.5 37 82 IPR001841 Zinc finger, RING-type SMART SM00184 1.0E-5 37 81 IPR001841 Zinc finger, RING-type