Basic information
Locus name	AT3G04520
Alias	THA2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:threonine aldolase activity
Effect for Senescence	unclear
Gene Description	Threonine Aldolase 2 (THA2); FUNCTIONS IN: threonine aldolase activity; INVOLVED IN: threonine catabolic process
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cellular amino acid metabolic process molecular function lyase activity
Sequence	AT3G04520.1 | Genomic | mRNA | CDS | Protein AT3G04520.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G04520.1  miRNA: ath-miR2111a-3p miRNA: ath-miR2111a-3p mfe: -35.5 kcal/mol  p-value: 0.001221  position: 402  target 5' C      G              G  3'             GGUGGU UGCAUCC GAGGAC                 CCAUUA GCGUAGG CUCCUG      miRNA  3'        G       G         5'  target: AT3G04520.2  miRNA: ath-miR2111a-3p miRNA: ath-miR2111a-3p mfe: -35.5 kcal/mol  p-value: 0.001156  position: 414  target 5' C      G              G  3'             GGUGGU UGCAUCC GAGGAC                 CCAUUA GCGUAGG CUCCUG      miRNA  3'        G       G         5'
Ortholog Group
Ortholog Groups: OG5_128639	Accession Taxon NP_001031001 Arabidopsis thaliana NP_001077492 Arabidopsis thaliana NP_563822 Arabidopsis thaliana NP_566228 ( AT3G04520 ) Arabidopsis thaliana NP_849614 Arabidopsis thaliana NP_849615 Arabidopsis thaliana 141056 Chlamydomonas reinhardtii ACO69328 Micromonas sp. RCC299 NP_001053314 Oryza sativa Japonica Group e_gw1.08.00.236.1 Ostreococcus tauri estExt_gwp_gw1.C_1020011 Physcomitrella patens subsp. patens 29680.m001689 Ricinus communis e_gw1.3.383.1 Thalassiosira pseudonana CCMP1335 estExt_fgenesh1_pg.C_chr_30089 Thalassiosira pseudonana CCMP1335 XP_002953274 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10289 1.3E-155 1 352 No hit NA PIRSF PIRSF017617 5.7E-221 1 354 IPR023603 Threonine aldolase SUPERFAMILY SSF53383 4.9E-108 10 353 IPR015424 Pyridoxal phosphate-dependent transferase Pfam PF01212 1.6E-91 11 297 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase Coils Coil NA 253 274 No hit NA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787