Leaf Senescence DataBase

Basic information

Locus name

AT2G43200

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Environmental factors:dehydration

Effect for Senescence

unclear

Gene Description

dehydration-responsive family protein

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

molecular function

Pathway

KEGG

map00130 (EC 2.1.1.-)
map00253 (EC 2.1.1.-)
map00340 (EC 2.1.1.-)
map00350 (EC 2.1.1.-)
map00360 (EC 2.1.1.-)
map00380 (EC 2.1.1.-)
map00402 (EC 2.1.1.-)
map00522 (EC 2.1.1.-)
map00624 (EC 2.1.1.-)
map00680 (EC 2.1.1.-)
map00860 (EC 2.1.1.-)
map00906 (EC 2.1.1.-)
map00940 (EC 2.1.1.-)
map00941 (EC 2.1.1.-)
map00942 (EC 2.1.1.-)
map00945 (EC 2.1.1.-)
map00950 (EC 2.1.1.-)
map00981 (EC 2.1.1.-)

Sequence

AT2G43200.1 | Genomic | mRNA | CDS | Protein

Ortholog Group

Ortholog Groups: OG5_134031

Accession	Taxon
NP_181849 ( AT2G43200 )	Arabidopsis thaliana
NP_182099	Arabidopsis thaliana
NP_191984	Arabidopsis thaliana
NP_192782	Arabidopsis thaliana
NP_193537	Arabidopsis thaliana
NP_564265	Arabidopsis thaliana
NP_564419	Arabidopsis thaliana
NP_849710	Arabidopsis thaliana
NP_849711	Arabidopsis thaliana
NP_001047721	Oryza sativa Japonica Group
NP_001050233	Oryza sativa Japonica Group
NP_001053603	Oryza sativa Japonica Group
NP_001056546	Oryza sativa Japonica Group
NP_001056669	Oryza sativa Japonica Group
NP_001063174	Oryza sativa Japonica Group
NP_001065036	Oryza sativa Japonica Group
NP_001065447	Oryza sativa Japonica Group
NP_001068227	Oryza sativa Japonica Group
e_gw1.266.4.1	Physcomitrella patens subsp. patens
estExt_Genewise1.C_430146	Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2350020	Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_336000040	Physcomitrella patens subsp. patens
29628.m000747	Ricinus communis
29813.m001477	Ricinus communis
30041.m000235	Ricinus communis
30068.m002633	Ricinus communis
30147.m014121	Ricinus communis
30147.m014295	Ricinus communis
30174.m008965	Ricinus communis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR10108	0.0	97	515	No hit	NA
Pfam	PF03141	2.0E-218	100	607	IPR004159	Putative S-adenosyl-L-methionine-dependent methyltransferase
SUPERFAMILY	SSF53335	3.7E-29	122	351	No hit	NA
Coils	Coil	NA	324	345	No hit	NA
SUPERFAMILY	SSF53335	3.4E-16	454	584	No hit	NA

Subcellular Localization

Localization

plasma membrane

Evidence

SUBAcon

Pubmed ID

23180787