Leaf Senescence DataBase

Basic information

Locus name

AT2G40670

Alias

ARR16

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Hormone response pathway:CK

Effect for Senescence

unclear

Gene Description

ARABIDOPSIS RESPONSE REGULATOR 16 (ARR16); FUNCTIONS IN: transcription regulator activity, two-component response regulator activity; INVOLVED IN: cytokinin mediated signaling, response to cytokinin stimulus

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	phosphorelay signal transduction system regulation of transcription, DNA-dependent
molecular function	phosphorelay response regulator activity

Pathway

Reactome

REACT_14797

Sequence

Ortholog Group

Ortholog Groups: OG5_175720

Accession	Taxon
NP_181599 ( AT2G40670 )	Arabidopsis thaliana
NP_567037	Arabidopsis thaliana
29729.m002374	Ricinus communis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR26402	6.6E-69	5	164	No hit	NA
SUPERFAMILY	SSF52172	1.9E-25	28	156	IPR011006	CheY-like superfamily
SMART	SM00448	4.9E-15	29	157	IPR001789	Signal transduction response regulator, receiver domain
ProSiteProfiles	PS50110	23.0	30	161	IPR001789	Signal transduction response regulator, receiver domain
Pfam	PF00072	1.1E-17	31	153	IPR001789	Signal transduction response regulator, receiver domain

Subcellular Localization

Localization 1
	Localization	other cytoplasmic components
	Evidence	Localization with GFP-fusion protein (GFP:cDNA)
	Pubmed ID	10737809

Localization 2
	Localization	nucleus
	Evidence	SUBAcon
	Pubmed ID	23180787