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About
Basic information
Locus name
AT5G60200
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:DOF
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
DNA binding
zinc ion binding
Sequence
AT5G60200.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_160244
Accession
Taxon
NP_190147
Arabidopsis thaliana
NP_201099
Arabidopsis thaliana
NP_568920
( AT5G60200 )
Arabidopsis thaliana
NP_001047876
Oryza sativa Japonica Group
e_gw1.170.52.1
Physcomitrella patens subsp. patens
gw1.12.257.1
Physcomitrella patens subsp. patens
30147.m013945
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31992
3.8E-46
35
257
No hit
NA
Pfam
PF02701
3.1E-37
53
111
IPR003851
Zinc finger, Dof-type
ProSiteProfiles
PS50884
29.5
55
109
IPR003851
Zinc finger, Dof-type
ProSitePatterns
PS01361
NA
57
93
IPR003851
Zinc finger, Dof-type
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787