Basic information
Locus name	AT2G39480
Alias	PGP6
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:ATPase
Effect for Senescence	unclear
Gene Description	P-GLYCOPROTEIN 6 (PGP6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process transmembrane transport transport cellular component integral to membrane molecular function ATP binding ATPase activity, coupled to transmembrane movement of substances ATPase activity
Sequence	AT2G39480.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126596	Accession Taxon NP_171753 Arabidopsis thaliana NP_171754 Arabidopsis thaliana NP_172538 Arabidopsis thaliana NP_174115 Arabidopsis thaliana NP_174122 Arabidopsis thaliana NP_181228 Arabidopsis thaliana NP_181480 ( AT2G39480 ) Arabidopsis thaliana NP_182223 Arabidopsis thaliana NP_189475 Arabidopsis thaliana NP_189477 Arabidopsis thaliana NP_189479 Arabidopsis thaliana NP_189480 Arabidopsis thaliana NP_189528 Arabidopsis thaliana NP_191092 Arabidopsis thaliana NP_191774 Arabidopsis thaliana NP_192091 Arabidopsis thaliana NP_192092 Arabidopsis thaliana NP_193539 Arabidopsis thaliana NP_194326 Arabidopsis thaliana NP_199466 Arabidopsis thaliana NP_683599 Arabidopsis thaliana CMD148C Cyanidioschyzon merolae strain 10D 138602 Chlamydomonas reinhardtii 138672 Chlamydomonas reinhardtii ACO66535 Micromonas sp. RCC299 NP_001042790 Oryza sativa Japonica Group NP_001043254 Oryza sativa Japonica Group NP_001043962 Oryza sativa Japonica Group NP_001044110 Oryza sativa Japonica Group NP_001045564 Oryza sativa Japonica Group NP_001046144 Oryza sativa Japonica Group NP_001046147 Oryza sativa Japonica Group NP_001046148 Oryza sativa Japonica Group NP_001047803 Oryza sativa Japonica Group NP_001049736 Oryza sativa Japonica Group NP_001052982 Oryza sativa Japonica Group NP_001053113 Oryza sativa Japonica Group NP_001054045 Oryza sativa Japonica Group NP_001056226 Oryza sativa Japonica Group NP_001062529 Oryza sativa Japonica Group estExt_gwp_GeneWisePlus.C_Chr_01.00010580 Ostreococcus tauri e_gw1.1.462.1 Physcomitrella patens subsp. patens e_gw1.173.88.1 Physcomitrella patens subsp. patens e_gw1.29.17.1 Physcomitrella patens subsp. patens e_gw1.38.19.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_3910045 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_2520035 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3380009 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3970003 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_188000008 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_28000043 Physcomitrella patens subsp. patens 28166.m001066 Ricinus communis 28180.m000390 Ricinus communis 28531.m000016 Ricinus communis 29581.m000253 Ricinus communis 29693.m002084 Ricinus communis 29693.m002086 Ricinus communis 29727.m000475 Ricinus communis 29822.m003425 Ricinus communis 29822.m003426 Ricinus communis 29822.m003496 Ricinus communis 29889.m003408 Ricinus communis 29889.m003409 Ricinus communis 29912.m005427 Ricinus communis 29929.m004786 Ricinus communis 30054.m000810 Ricinus communis 30076.m004556 Ricinus communis 30076.m004557 Ricinus communis 30076.m004558 Ricinus communis 30076.m004559 Ricinus communis 30078.m002286 Ricinus communis 30098.m001722 Ricinus communis 30170.m014384 Ricinus communis e_gw1.12.4.1 Thalassiosira pseudonana CCMP1335 estExt_fgenesh1_pg.C_chr_30897 Thalassiosira pseudonana CCMP1335 estExt_fgenesh1_pg.C_chr_50031 Thalassiosira pseudonana CCMP1335 XP_002946641 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF90123 4.3E-44 74 387 IPR011527 ABC transporter, transmembrane domain, type 1 PANTHER PTHR24221 0.0 76 1397 No hit NA ProSiteProfiles PS50929 37.3 87 379 IPR017940 ABC transporter, integral membrane type 1 Pfam PF00664 2.2E-31 93 361 IPR001140 ABC transporter, transmembrane domain Coils Coil NA 258 279 No hit NA SUPERFAMILY SSF52540 1.3E-75 402 646 IPR027417 P-loop containing nucleoside triphosphate hydrolase ProSiteProfiles PS50893 21.1 412 647 IPR003439 ABC transporter-like SMART SM00382 7.1E-7 439 610 IPR003593 AAA+ ATPase domain Pfam PF00005 5.2E-14 454 577 IPR003439 ABC transporter-like SUPERFAMILY SSF90123 9.3E-50 819 1143 IPR011527 ABC transporter, transmembrane domain, type 1 ProSiteProfiles PS50929 36.9 836 1111 IPR017940 ABC transporter, integral membrane type 1 Pfam PF00664 1.2E-39 842 1111 IPR001140 ABC transporter, transmembrane domain SUPERFAMILY SSF52540 1.7E-81 1148 1394 IPR027417 P-loop containing nucleoside triphosphate hydrolase ProSiteProfiles PS50893 22.8 1158 1395 IPR003439 ABC transporter-like SMART SM00382 2.7E-14 1185 1372 IPR003593 AAA+ ATPase domain Pfam PF00005 1.1E-18 1200 1324 IPR003439 ABC transporter-like
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787