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Locus name | AT2G44480 |
Alias | BGLU17 | Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Lipid/Carbohydrate metabolism | Effect for Senescence | unclear | Gene Description | BETA GLUCOSIDASE 17 (BGLU17); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT2G44480.1 | Genomic | mRNA | CDS | Protein AT2G44480.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
| Details | | target: AT2G44480.1 miRNA: ath-miR5658 miRNA: ath-miR5658 mfe: -33.4 kcal/mol p-value: 0.000131
position: 64 target 5' A G 3' UUUAUCAUCAUCAUCAUCA AAGUAGUAGUAGUAGUAGU miRNA 3' A A 5'
target: AT2G44480.2 miRNA: ath-miR5658 miRNA: ath-miR5658 mfe: -33.4 kcal/mol p-value: 0.000155
position: 64 target 5' A G 3' UUUAUCAUCAUCAUCAUCA AAGUAGUAGUAGUAGUAGU miRNA 3' A A 5'
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Ortholog Group | |
| Ortholog Groups: OG5_189612 | |
Cross Link | |
| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR10353 | 4.0E-281 | 6 | 510 | IPR001360 | Glycoside hydrolase, family 1 | SUPERFAMILY | SSF51445 | 1.8E-181 | 33 | 509 | IPR017853 | Glycoside hydrolase, superfamily | Pfam | PF00232 | 1.0E-157 | 37 | 510 | IPR001360 | Glycoside hydrolase, family 1 | ProSitePatterns | PS00653 | NA | 44 | 58 | IPR018120 | Glycoside hydrolase, family 1, active site | PRINTS | PR00131 | 4.1E-21 | 337 | 351 | IPR001360 | Glycoside hydrolase, family 1 | PRINTS | PR00131 | 4.1E-21 | 413 | 421 | IPR001360 | Glycoside hydrolase, family 1 | PRINTS | PR00131 | 4.1E-21 | 436 | 447 | IPR001360 | Glycoside hydrolase, family 1 | PRINTS | PR00131 | 4.1E-21 | 457 | 474 | IPR001360 | Glycoside hydrolase, family 1 | PRINTS | PR00131 | 4.1E-21 | 481 | 493 | IPR001360 | Glycoside hydrolase, family 1 |
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