Basic information
Locus name	AT2G45040
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:metalloendopeptidase
Effect for Senescence	unclear
Gene Description	matrix metalloproteinase; FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process proteolysis cellular component extracellular matrix molecular function metalloendopeptidase activity zinc ion binding
Sequence	AT2G45040.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_190128	Accession Taxon NP_182030 ( AT2G45040 ) Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF47090 1.3E-14 50 110 IPR002477 Peptidoglycan binding-like Pfam PF01471 3.3E-10 51 100 IPR002477 Peptidoglycan binding-like PANTHER PTHR10201 3.3E-145 52 301 No hit NA PRINTS PR00138 5.7E-36 101 114 IPR021190 Peptidase M10A SUPERFAMILY SSF55486 4.2E-40 125 299 No hit NA SMART SM00235 2.0E-44 130 297 IPR006026 Peptidase, metallopeptidase Pfam PF00413 8.5E-48 134 296 IPR001818 Peptidase M10, metallopeptidase PRINTS PR00138 5.7E-36 164 179 IPR021190 Peptidase M10A PRINTS PR00138 5.7E-36 188 216 IPR021190 Peptidase M10A PRINTS PR00138 5.7E-36 249 274 IPR021190 Peptidase M10A PRINTS PR00138 5.7E-36 283 296 IPR021190 Peptidase M10A