Basic information
Locus name	AT2G45660
Alias	AGL20/SOC1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:MADS
Effect for Senescence	promote
Gene Description	Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.
Evidence	Genetic evidence:Mutant [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94 2: Melzer S, Lens F, Gennen J, Vanneste S, Rohde A, Beeckman T Flowering-time genes modulate meristem determinacy and growth form in Arabidopsis thaliana. Nat. Genet. 2008 Dec;40(12):1489-92
Gene Ontology	molecular function DNA binding protein dimerization activity
Pathway	Reactome REACT_21303
Sequence	AT2G45660.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutated 1 Mutant name soc1-3 ful-2 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type cross
Mutated 2 Mutant name 35S:FT soc1-3 ful-2 Mutant/Transgenic mutant Ecotype Col-0 Mutagenesis type cross
Ortholog Group
Ortholog Groups: OG5_190130	Accession Taxon NP_182090 ( AT2G45660 ) Arabidopsis thaliana NP_001048801 Oryza sativa Japonica Group NP_001065168 Oryza sativa Japonica Group
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11945 2.6E-79 1 178 No hit NA ProSiteProfiles PS50066 31.7 1 61 IPR002100 Transcription factor, MADS-box SMART SM00432 3.8E-41 1 60 IPR002100 Transcription factor, MADS-box PRINTS PR00404 8.0E-31 3 23 IPR002100 Transcription factor, MADS-box ProSitePatterns PS00350 NA 3 57 IPR002100 Transcription factor, MADS-box SUPERFAMILY SSF55455 1.0E-33 3 83 IPR002100 Transcription factor, MADS-box Pfam PF00319 6.0E-28 9 59 IPR002100 Transcription factor, MADS-box PRINTS PR00404 8.0E-31 23 38 IPR002100 Transcription factor, MADS-box PRINTS PR00404 8.0E-31 38 59 IPR002100 Transcription factor, MADS-box Pfam PF01486 1.4E-27 77 171 IPR002487 Transcription factor, K-box Coils Coil NA 87 115 No hit NA ProSiteProfiles PS51297 15.7 87 177 IPR002487 Transcription factor, K-box Coils Coil NA 121 142 No hit NA Coils Coil NA 143 171 No hit NA
Mutant Image
both attached and detached leaves of soc1-6 showed accelerated yellowing phenotypes
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787