Basic information
Locus name	AT2G26060
Alias	emb1345
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	embryo defective 1345 (emb1345); FUNCTIONS IN: nucleotide binding; INVOLVED IN: embryonic development ending in seed dormancy
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G26060.1 | Genomic | mRNA | CDS | Protein AT2G26060.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127906	Accession Taxon NP_001031421 Arabidopsis thaliana NP_195025 Arabidopsis thaliana NP_565615 ( AT2G26060 ) Arabidopsis thaliana CMQ257C Cyanidioschyzon merolae strain 10D 130093 Chlamydomonas reinhardtii NP_113088 Guillardia theta ACO66810 Micromonas sp. RCC299 NP_001059302 Oryza sativa Japonica Group e_gw1.14.00.201.1 Ostreococcus tauri gw1.132.27.1 Physcomitrella patens subsp. patens 29625.m000707 Ricinus communis e_gw1.17.93.1 Thalassiosira pseudonana CCMP1335 estExt_gwp_gw1.C_chr_170017 Thalassiosira pseudonana CCMP1335 XP_002952919 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR19920 1.3E-157 1 333 No hit NA SUPERFAMILY SSF50978 2.0E-63 8 328 IPR017986 WD40-repeat-containing domain SMART SM00320 2.0E-9 9 55 IPR001680 WD40 repeat Pfam PF00400 6.4E-12 13 55 IPR001680 WD40 repeat ProSiteProfiles PS50082 11.3 16 55 IPR001680 WD40 repeat ProSiteProfiles PS50294 40.1 16 250 IPR017986 WD40-repeat-containing domain PRINTS PR00320 5.8E-5 42 56 IPR020472 G-protein beta WD-40 repeat SMART SM00320 3.9E-8 62 102 IPR001680 WD40 repeat Pfam PF00400 1.3E-12 63 102 IPR001680 WD40 repeat ProSiteProfiles PS50082 12.2 70 102 IPR001680 WD40 repeat SMART SM00320 2.0E-10 107 146 IPR001680 WD40 repeat Pfam PF00400 1.1E-11 109 146 IPR001680 WD40 repeat ProSiteProfiles PS50082 14.0 114 147 IPR001680 WD40 repeat PRINTS PR00320 5.8E-5 133 147 IPR020472 G-protein beta WD-40 repeat ProSitePatterns PS00678 NA 133 147 IPR019775 WD40 repeat, conserved site SMART SM00320 5.9E-7 152 191 IPR001680 WD40 repeat Pfam PF00400 3.5E-10 154 190 IPR001680 WD40 repeat ProSiteProfiles PS50082 13.6 159 190 IPR001680 WD40 repeat SMART SM00320 2.1E-6 198 241 IPR001680 WD40 repeat ProSiteProfiles PS50082 12.2 209 240 IPR001680 WD40 repeat Pfam PF00400 2.5E-7 210 240 IPR001680 WD40 repeat PRINTS PR00320 5.8E-5 228 242 IPR020472 G-protein beta WD-40 repeat SMART SM00320 0.5 255 294 IPR001680 WD40 repeat Pfam PF00400 0.0 266 293 IPR001680 WD40 repeat Pfam PF00400 0.1 310 328 IPR001680 WD40 repeat
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787