Basic information
Locus name	AT2G20560
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification(protein folding)
Effect for Senescence	unclear
Gene Description	DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein folding molecular function unfolded protein binding
Sequence	AT2G20560.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126773	Accession Taxon NP_172506 Arabidopsis thaliana NP_176181 Arabidopsis thaliana NP_179646 ( AT2G20560 ) Arabidopsis thaliana NP_187503 Arabidopsis thaliana NP_194577 Arabidopsis thaliana NP_195759 Arabidopsis thaliana NP_197935 Arabidopsis thaliana CMO101C Cyanidioschyzon merolae strain 10D 117743 Chlamydomonas reinhardtii 298 Chlamydomonas reinhardtii 96566 Chlamydomonas reinhardtii ACO67673 Micromonas sp. RCC299 ACO70347 Micromonas sp. RCC299 NP_001042543 Oryza sativa Japonica Group NP_001046640 Oryza sativa Japonica Group NP_001056320 Oryza sativa Japonica Group NP_001061053 Oryza sativa Japonica Group 0500010461 Ostreococcus tauri gw1.05.00.339.1 Ostreococcus tauri estExt_Genewise1.C_1930038 Physcomitrella patens subsp. patens estExt_Genewise1.C_1990037 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1280073 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_830027 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_507000001 Physcomitrella patens subsp. patens 29701.m000582 Ricinus communis 29736.m002058 Ricinus communis 29794.m003494 Ricinus communis 29983.m003129 Ricinus communis 30190.m011309 Ricinus communis thaps1_ua_kg.chr_1000251 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_4000315 Thalassiosira pseudonana CCMP1335 XP_002948221 Volvox carteri f. nagariensis XP_002952058 Volvox carteri f. nagariensis XP_002956450 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24077 1.1E-115 1 336 No hit NA SMART SM00271 4.4E-33 3 62 IPR001623 DnaJ domain SUPERFAMILY SSF46565 4.7E-31 3 123 IPR001623 DnaJ domain Pfam PF00226 5.7E-28 4 67 IPR001623 DnaJ domain ProSiteProfiles PS50076 24.5 4 70 IPR001623 DnaJ domain PRINTS PR00625 5.4E-29 6 24 IPR001623 DnaJ domain PRINTS PR00625 5.4E-29 24 39 IPR001623 DnaJ domain PRINTS PR00625 5.4E-29 42 62 IPR001623 DnaJ domain ProSitePatterns PS00636 NA 47 66 IPR018253 DnaJ domain, conserved site PRINTS PR00625 5.4E-29 62 81 IPR001623 DnaJ domain SUPERFAMILY SSF49493 7.6E-18 157 253 IPR008971 HSP40/DnaJ peptide-binding SUPERFAMILY SSF49493 1.4E-21 244 329 IPR008971 HSP40/DnaJ peptide-binding Pfam PF01556 8.8E-22 251 329 IPR002939 Chaperone DnaJ, C-terminal