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About
Basic information
Locus name
AT3G58120
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:bZIP
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
sequence-specific DNA binding
Sequence
AT3G58120.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_139329
Accession
Taxon
NP_191371
( AT3G58120 )
Arabidopsis thaliana
NP_565970
Arabidopsis thaliana
NP_850369
Arabidopsis thaliana
NP_001042375
Oryza sativa Japonica Group
NP_001044286
Oryza sativa Japonica Group
NP_001046429
Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_160081
Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_220219
Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_2820001
Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_380157
Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_620041
Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_2000042
Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_93000087
Physcomitrella patens subsp. patens
29646.m001108
Ricinus communis
fgenesh1_pg.C_chr_2000128
Thalassiosira pseudonana CCMP1335
XP_002958352
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR22952
2.7E-47
120
317
No hit
NA
SMART
SM00338
1.1E-13
200
264
IPR004827
Basic-leucine zipper domain
Pfam
PF07716
8.3E-9
202
249
IPR004827
Basic-leucine zipper domain
ProSiteProfiles
PS50217
9.6
202
254
IPR004827
Basic-leucine zipper domain
SUPERFAMILY
SSF57959
2.5E-11
204
258
No hit
NA
ProSitePatterns
PS00036
NA
207
222
IPR004827
Basic-leucine zipper domain
Coils
Coil
NA
283
304
No hit
NA
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787