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About
Basic information
Locus name
AT1G12260
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:NAC
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
DNA binding
Sequence
AT1G12260.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_140455
Accession
Taxon
NP_172690
( AT1G12260 )
Arabidopsis thaliana
NP_176457
Arabidopsis thaliana
NP_001053424
Oryza sativa Japonica Group
NP_001056549
Oryza sativa Japonica Group
NP_001060775
Oryza sativa Japonica Group
e_gw1.161.49.1
Physcomitrella patens subsp. patens
e_gw1.201.156.1
Physcomitrella patens subsp. patens
e_gw1.70.85.1
Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2230002
Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_182000024
Physcomitrella patens subsp. patens
gw1.1.690.1
Physcomitrella patens subsp. patens
gw1.6.394.1
Physcomitrella patens subsp. patens
gw1.77.154.1
Physcomitrella patens subsp. patens
28200.m000189
Ricinus communis
30147.m014211
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31989
1.7E-118
1
368
No hit
NA
SUPERFAMILY
SSF101941
3.9E-60
5
156
IPR003441
No apical meristem (NAM) protein
Pfam
PF02365
1.6E-53
7
136
IPR003441
No apical meristem (NAM) protein
ProSiteProfiles
PS51005
59.2
7
156
IPR003441
No apical meristem (NAM) protein
Coils
Coil
NA
288
309
No hit
NA
Mutant Image
normal leaf senescence