Basic information
Locus name	AT1G77570
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation(HSF)
Effect for Senescence	unclear
Gene Description	DNA binding / transcription factor; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent cellular component nucleus molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT1G77570.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_159633	Accession Taxon NP_177880 ( AT1G77570 ) Arabidopsis thaliana estExt_fgenesh1_pg.C_chr_240021 Thalassiosira pseudonana CCMP1335 estExt_fgenesh1_pg.C_chr_80323 Thalassiosira pseudonana CCMP1335 estExt_thaps1_ua_kg.C_chr_10275 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_3000352 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_6000326 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description SMART SM00415 4.4E-18 22 122 IPR000232 Heat shock factor (HSF)-type, DNA-binding PANTHER PTHR10015 6.1E-71 23 125 No hit NA SUPERFAMILY SSF46785 1.1E-19 26 116 No hit NA Pfam PF00447 8.9E-15 27 120 IPR000232 Heat shock factor (HSF)-type, DNA-binding PRINTS PR00056 5.2E-5 27 50 IPR000232 Heat shock factor (HSF)-type, DNA-binding PRINTS PR00056 5.2E-5 79 91 IPR000232 Heat shock factor (HSF)-type, DNA-binding