Basic information
Locus name	AT1G76820
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	GTP binding / GTPase; FUNCTIONS IN: GTP binding, GTPase activity
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function GTP binding GTPase activity
Sequence	AT1G76820.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G76820.1  miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -26.9 kcal/mol  p-value: 0.022903  position: 2007  target 5' A    G  C           A  3'             GAGA GA CAGGGAACUGA                 CUUU CU GUUCUUUGACU      miRNA  3' A    G  U           A  5'
Ortholog Group
Ortholog Groups: OG5_127312	Accession Taxon NP_001118399 Arabidopsis thaliana NP_173540 Arabidopsis thaliana NP_177798 Arabidopsis thaliana NP_177807 Arabidopsis thaliana NP_180338 Arabidopsis thaliana NP_565140 ( AT1G76820 ) Arabidopsis thaliana CML150C Cyanidioschyzon merolae strain 10D 141272 Chlamydomonas reinhardtii ACO68578 Micromonas sp. RCC299 NP_001056497 Oryza sativa Japonica Group e_gw1.03.00.98.1 Ostreococcus tauri e_gw1.247.8.1 Physcomitrella patens subsp. patens 29701.m000590 Ricinus communis fgenesh1_pm.C_chr_2000043 Thalassiosira pseudonana CCMP1335 XP_002954887 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 298 382 No hit NA PANTHER PTHR23115 0.0 304 1165 No hit NA SUPERFAMILY SSF52540 1.2E-65 574 866 IPR027417 P-loop containing nucleoside triphosphate hydrolase Pfam PF00009 7.7E-33 577 786 IPR000795 Elongation factor, GTP-binding domain TIGRFAM TIGR00231 6.8E-17 578 706 IPR005225 Small GTP-binding protein domain PRINTS PR00315 6.8E-8 579 592 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 6.8E-8 643 653 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 6.8E-8 659 670 IPR000795 Elongation factor, GTP-binding domain PRINTS PR00315 6.8E-8 695 704 IPR000795 Elongation factor, GTP-binding domain Pfam PF03144 2.7E-10 814 891 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 SUPERFAMILY SSF52156 1.3E-32 900 1029 IPR023115 Translation initiation factor IF- 2, domain 3 Pfam PF11987 1.0E-18 910 1016 IPR023115 Translation initiation factor IF- 2, domain 3 SUPERFAMILY SSF50447 3.0E-30 1034 1164 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel