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Locus name | AT1G63800 |
Alias | UBC5 | Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Protein degradation/modification | Effect for Senescence | unclear | Gene Description | ubiquitin-conjugating enzyme 5 (UBC5); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Pathway | | Sequence | AT1G63800.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
| Details | | target: AT1G63800.1 miRNA: ath-miR414 miRNA: ath-miR414 mfe: -37.1 kcal/mol p-value: 0.000026
position: 584 target 5' G U 3' GAUGGUGAUGAUGAAGAUGA CUGCUACUACUACUUCUACU miRNA 3' A 5'
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Ortholog Group | |
| Ortholog Groups: OG5_128230 | |
Cross Link | |
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| Localization | cytosol | Evidence | SUBAcon | Pubmed ID | 23180787 |
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