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Locus name | AT1G63650 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Transcription regulation:bHLH |
Effect for Senescence | Unclear |
Gene Description | Upregulated in senescent leaves |
Evidence | Molecular evidence:Real-Time PCR [Ref 1] |
References | 1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber BTranscription factors regulating leaf senescence in Arabidopsis thaliana.Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75 |
Gene Ontology | |
Sequence | AT1G63650.1 | Genomic | mRNA | CDS | Protein AT1G63650.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT1G63650.1 miRNA: ath-miR414 miRNA: ath-miR414 mfe: -23.8 kcal/mol p-value: 0.020631
position: 1562 target 5' G A C G A 3' GAU A GAUGAUGAAGA GA CUG U CUACUACUUCU CU miRNA 3' A C A A 5'
target: AT1G63650.1 miRNA: ath-miR847 miRNA: ath-miR847 mfe: -29.6 kcal/mol p-value: 0.005941
position: 1628 target 5' A G A U 3' CA CAA AGGAAGGGGAGUGA GU GUU UUCUUCUCCUCACU miRNA 3' A C 5'
target: AT1G63650.2 miRNA: ath-miR414 miRNA: ath-miR414 mfe: -23.8 kcal/mol p-value: 0.019786
position: 1484 target 5' G A C G A 3' GAU A GAUGAUGAAGA GA CUG U CUACUACUUCU CU miRNA 3' A C A A 5'
target: AT1G63650.2 miRNA: ath-miR847 miRNA: ath-miR847 mfe: -29.6 kcal/mol p-value: 0.005677
position: 1550 target 5' A G A U 3' CA CAA AGGAAGGGGAGUGA GU GUU UUCUUCUCCUCACU miRNA 3' A C 5'
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Ortholog Group | |
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Ortholog Groups: OG5_141651 | |
Cross Link | |
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Localization | nucleus |
Evidence | SUBAcon |
Pubmed ID | 23180787 |