Basic information
Locus name	AT1G56010
Alias	NAC1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation(NAC)
Effect for Senescence	unclear
Gene Description	NAC1; FUNCTIONS IN: transcription factor activity
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT1G56010.1 | Genomic | mRNA | CDS | Protein AT1G56010.2 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	nac1
Mutant/Transgenic	mutant
Ecotype	Col-0
Mutagenesis type	T-DNA insertion_knock out
miRNA Interaction
Details	target: AT1G56010.1  miRNA: ath-miR164a miRNA: ath-miR164a mfe: -43.4 kcal/mol  p-value: 0.000042  position: 777  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' A      C                5'  target: AT1G56010.1  miRNA: ath-miR164b miRNA: ath-miR164b mfe: -43.4 kcal/mol  p-value: 0.000031  position: 777  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' A      C                5'  target: AT1G56010.1  miRNA: ath-miR164c miRNA: ath-miR164c mfe: -43.4 kcal/mol  p-value: 0.000087  position: 777  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' G      C                5'  target: AT1G56010.2  miRNA: ath-miR164a miRNA: ath-miR164a mfe: -43.4 kcal/mol  p-value: 0.000043  position: 802  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' A      C                5'  target: AT1G56010.2  miRNA: ath-miR164b miRNA: ath-miR164b mfe: -43.4 kcal/mol  p-value: 0.000032  position: 802  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' A      C                5'  target: AT1G56010.2  miRNA: ath-miR164c miRNA: ath-miR164c mfe: -43.4 kcal/mol  p-value: 0.000089  position: 802  target 5' A      A             A  3'             GCACGU CCCUGCUUCUCCA                 CGUGCA GGGACGAAGAGGU      miRNA  3' G      C                5'
Ortholog Group
Ortholog Groups: OG5_164225	Accession Taxon NP_001030683 Arabidopsis thaliana NP_175997 ( AT1G56010 ) Arabidopsis thaliana NP_849817 Arabidopsis thaliana NP_001058346 Oryza sativa Japonica Group NP_001061213 Oryza sativa Japonica Group 29650.m000275 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31427 5.9E-146 3 323 No hit NA SUPERFAMILY SSF101941 2.5E-61 7 172 IPR003441 No apical meristem (NAM) protein Pfam PF02365 9.0E-49 19 145 IPR003441 No apical meristem (NAM) protein ProSiteProfiles PS51005 56.3 19 171 IPR003441 No apical meristem (NAM) protein
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787