Basic information
Locus name	AT1G53030
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	cytochrome c oxidase copper chaperone family protein; FUNCTIONS IN: copper chaperone activity; INVOLVED IN: copper ion transport; LOCATED IN: mitochondrial intermembrane space
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process copper ion transport cellular component mitochondrial intermembrane space molecular function copper chaperone activity copper ion binding
Sequence	AT1G53030.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_129050	Accession Taxon NP_175711 ( AT1G53030 ) Arabidopsis thaliana NP_566508 Arabidopsis thaliana CMS431C Cyanidioschyzon merolae strain 10D 154148 Chlamydomonas reinhardtii ACO68114 Micromonas sp. RCC299 NP_001048378 Oryza sativa Japonica Group NP_001063198 Oryza sativa Japonica Group e_gw1.15.00.309.1 Ostreococcus tauri estExt_gwp_gw1.C_830192 Physcomitrella patens subsp. patens gw1.213.55.1 Physcomitrella patens subsp. patens 29616.m000225 Ricinus communis thaps1_ua_kg.chr_14000003 Thalassiosira pseudonana CCMP1335 XP_002953197 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR16719 7.8E-39 13 72 IPR007745 Cytochrome c oxidase copper chaperone SUPERFAMILY SSF47072 2.3E-19 20 72 IPR009069 Cysteine alpha-hairpin motif superfamily Pfam PF05051 8.4E-23 25 72 IPR007745 Cytochrome c oxidase copper chaperone