Basic information
Locus name	AT1G47056
Alias	VFB1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	VIER F-BOX PROTEINE 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT1G47056.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_159723	Accession Taxon NP_175151 ( AT1G47056 ) Arabidopsis thaliana NP_567316 Arabidopsis thaliana NP_001053254 Oryza sativa Japonica Group e_gw1.68.188.1 Physcomitrella patens subsp. patens gw1.269.14.1 Physcomitrella patens subsp. patens 30170.m013826 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23125 1.8E-248 27 490 No hit NA ProSiteProfiles PS50181 9.0 37 82 IPR001810 F-box domain, cyclin-like Pfam PF12937 2.9E-6 40 70 No hit NA SUPERFAMILY SSF52047 3.1E-39 56 428 No hit NA SMART SM00367 7.6E-4 129 154 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 41.0 180 205 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 16.0 282 307 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 1.4 308 333 No hit NA SMART SM00367 22.0 308 335 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 36.0 361 386 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 0.1 387 410 No hit NA SMART SM00367 2.6E-4 387 411 IPR006553 Leucine-rich repeat, cysteine-containing subtype