Basic information
Locus name	AT1G35190
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	xidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process oxidation-reduction process molecular function iron ion binding oxidoreductase activity
Sequence	AT1G35190.1 | Genomic | mRNA | CDS | Protein AT1G35190.2 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_126909	Accession Taxon NP_001030834 Arabidopsis thaliana NP_001077664 Arabidopsis thaliana NP_174753 ( AT1G35190 ) Arabidopsis thaliana NP_175233 Arabidopsis thaliana NP_177965 Arabidopsis thaliana NP_190233 Arabidopsis thaliana NP_190531 Arabidopsis thaliana NP_190532 Arabidopsis thaliana NP_566930 Arabidopsis thaliana NP_680716 Arabidopsis thaliana NP_849544 Arabidopsis thaliana NP_974407 Arabidopsis thaliana 187819 Chlamydomonas reinhardtii ACO61595 Micromonas sp. RCC299 ACO64040 Micromonas sp. RCC299 ACO64444 Micromonas sp. RCC299 ACO64998 Micromonas sp. RCC299 ACO65572 Micromonas sp. RCC299 NP_001042255 Oryza sativa Japonica Group NP_001062658 Oryza sativa Japonica Group NP_001062669 Oryza sativa Japonica Group NP_001065100 Oryza sativa Japonica Group NP_001065102 Oryza sativa Japonica Group e_gw1.12.00.235.1 Ostreococcus tauri e_gw1.13.00.313.1 Ostreococcus tauri estExt_Genewise1.C_1910057 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1800040 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3270021 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_500017 Physcomitrella patens subsp. patens 27401.m000275 Ricinus communis 29644.m000184 Ricinus communis 29912.m005445 Ricinus communis 36270.m000025 Ricinus communis e_gw1.1.524.1 Thalassiosira pseudonana CCMP1335 e_gw1.7.272.1 Thalassiosira pseudonana CCMP1335 XP_002949877 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF51197 1.3E-92 11 322 No hit NA Pfam PF14226 3.2E-33 13 128 IPR026992 Non-haem dioxygenase N-terminal domain PANTHER PTHR10209 4.8E-116 15 320 No hit NA PRINTS PR00682 5.4E-19 29 46 IPR002283 Isopenicillin N synthase PRINTS PR00682 5.4E-19 119 135 IPR002283 Isopenicillin N synthase PRINTS PR00682 5.4E-19 152 168 IPR002283 Isopenicillin N synthase ProSiteProfiles PS51471 12.0 177 281 IPR005123 Oxoglutarate/iron-dependent dioxygenase Pfam PF03171 5.3E-21 181 281 IPR005123 Oxoglutarate/iron-dependent dioxygenase PRINTS PR00682 5.4E-19 242 268 IPR002283 Isopenicillin N synthase PRINTS PR00682 5.4E-19 269 287 IPR002283 Isopenicillin N synthase