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About
Basic information
Locus name
AT5G25390
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:AP2-EREBP
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
AT5G25390.1 |
Genomic
|
mRNA
|
CDS
|
Protein
AT5G25390.2 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_178041
Accession
Taxon
NP_196680
Arabidopsis thaliana
NP_197921
( AT5G25390 )
Arabidopsis thaliana
NP_851073
Arabidopsis thaliana
29848.m004632
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31194
4.5E-111
1
186
No hit
NA
Pfam
PF00847
6.0E-14
5
52
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
20.2
6
60
IPR001471
AP2/ERF domain
SMART
SM00380
4.3E-34
6
66
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
9.2E-18
6
61
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
3.6E-9
7
18
IPR001471
AP2/ERF domain
PRINTS
PR00367
3.6E-9
26
42
IPR001471
AP2/ERF domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787