Basic information
Locus name	AT1G33030
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	O-methyltransferase family 2 protein; FUNCTIONS IN: O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function O-methyltransferase activity methyltransferase activity protein dimerization activity
Sequence	AT1G33030.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT1G33030.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.0 kcal/mol  p-value: 0.000578  position: 636  target 5' U     U               C  3'             UGAUG UGGUGGUGGAGAUGG                 ACUGC ACUACUACUUCUACU      miRNA  3'       U                  5'
Ortholog Group
Ortholog Groups: OG5_188806	Accession Taxon NP_174579 ( AT1G33030 ) Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF005739 3.8E-185 1 350 IPR016461 Caffeate O-methyltransferase (COMT) family ProSiteProfiles PS51588 31.8 4 347 IPR016461 Caffeate O-methyltransferase (COMT) family SUPERFAMILY SSF46785 2.2E-23 5 104 No hit NA PANTHER PTHR11746 5.8E-75 13 351 No hit NA Pfam PF08100 4.5E-15 21 71 IPR012967 Plant methyltransferase dimerisation Pfam PF00891 6.6E-75 90 326 IPR001077 O-methyltransferase, family 2 SUPERFAMILY SSF53335 1.7E-53 107 347 No hit NA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787