Basic information
Locus name	AT1G30820
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nucleic acid metabolic process
Effect for Senescence	unclear
Gene Description	CTP synthase, putative / UTP--ammonia ligase, putative; FUNCTIONS IN: CTP synthase activity, catalytic activity; INVOLVED IN: pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process pyrimidine nucleotide biosynthetic process molecular function CTP synthase activity
Pathway	KEGG map00240 (EC 6.3.4.2) MetaCyc PWY-5687 Reactome REACT_1698
Sequence	AT1G30820.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G30820.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -32.3 kcal/mol  p-value: 0.000809  position: 522  target 5' G                    A  3'             GACGAUGGUGGUG AGGUGG                 CUGCUACUACUAC UCUACU      miRNA  3' A             U         5'
Ortholog Group
Ortholog Groups: OG5_126851	Accession Taxon NP_001078411 Arabidopsis thaliana NP_174368 ( AT1G30820 ) Arabidopsis thaliana NP_181035 Arabidopsis thaliana NP_187873 Arabidopsis thaliana NP_192121 Arabidopsis thaliana NP_193765 Arabidopsis thaliana CMP216C Cyanidioschyzon merolae strain 10D 176554 Chlamydomonas reinhardtii ACO68482 Micromonas sp. RCC299 NP_001043581 Oryza sativa Japonica Group NP_001043745 Oryza sativa Japonica Group NP_001056365 Oryza sativa Japonica Group NP_001056382 Oryza sativa Japonica Group NP_001067005 Oryza sativa Japonica Group estExt_gwp_GeneWisePlus.C_Chr_01.00010360 Ostreococcus tauri estExt_Genewise1.C_1610051 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1080086 Physcomitrella patens subsp. patens 30076.m004688 Ricinus communis 30162.m001257 Ricinus communis e_gw1.7.68.1 Thalassiosira pseudonana CCMP1335 estExt_thaps1_ua_kg.C_chr_60175 Thalassiosira pseudonana CCMP1335 XP_002958660 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Hamap MF_01227 45.9 1 550 IPR004468 CTP synthase PANTHER PTHR11550 0.0 1 555 IPR004468 CTP synthase Pfam PF06418 4.3E-123 1 274 IPR017456 CTP synthase, N-terminal SUPERFAMILY SSF52540 7.1E-121 1 272 IPR027417 P-loop containing nucleoside triphosphate hydrolase TIGRFAM TIGR00337 1.6E-229 1 545 IPR004468 CTP synthase SUPERFAMILY SSF52317 6.2E-74 298 547 No hit NA ProSiteProfiles PS51273 24.3 299 552 IPR017926 Glutamine amidotransferase Pfam PF00117 1.4E-58 309 544 IPR017926 Glutamine amidotransferase