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About
Basic information
Locus name
AT4G01500
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:ABI3VP1
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
DNA binding
Sequence
AT4G01500.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_156384
Accession
Taxon
NP_171611
Arabidopsis thaliana
NP_191756
Arabidopsis thaliana
NP_192059
( AT4G01500 )
Arabidopsis thaliana
NP_566089
Arabidopsis thaliana
NP_001047754
Oryza sativa Japonica Group
NP_001048792
Oryza sativa Japonica Group
30068.m002615
Ricinus communis
30076.m004471
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31140
2.5E-86
1
333
No hit
NA
SUPERFAMILY
SSF101936
4.2E-30
32
121
IPR015300
DNA-binding pseudobarrel domain
Pfam
PF02362
4.8E-27
36
121
IPR003340
B3 DNA binding domain
ProSiteProfiles
PS50863
13.8
36
145
IPR003340
B3 DNA binding domain
SMART
SM01019
5.4E-23
36
137
IPR003340
B3 DNA binding domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787