Basic information
Locus name	AT1G28130
Alias	GH3.17
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:Auxin
Effect for Senescence	unclear
Gene Description	GH3.17; FUNCTIONS IN: indole-3-acetic acid amido synthetase activity; INVOLVED IN: auxin homeostasis, response to auxin stimulus
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Pathway	KEGG map00380 (EC 6.3.2.-)
Sequence	AT1G28130.1 | Genomic | mRNA | CDS | Protein AT1G28130.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_131781	Accession Taxon NP_001031874 Arabidopsis thaliana NP_173729 Arabidopsis thaliana NP_174134 ( AT1G28130 ) Arabidopsis thaliana NP_175299 Arabidopsis thaliana NP_175300 Arabidopsis thaliana NP_176159 Arabidopsis thaliana NP_179101 Arabidopsis thaliana NP_179898 Arabidopsis thaliana NP_182296 Arabidopsis thaliana NP_194456 Arabidopsis thaliana NP_195455 Arabidopsis thaliana NP_196836 Arabidopsis thaliana NP_196839 Arabidopsis thaliana NP_196840 Arabidopsis thaliana NP_196841 Arabidopsis thaliana NP_196842 Arabidopsis thaliana NP_199960 Arabidopsis thaliana NP_200262 Arabidopsis thaliana NP_849718 Arabidopsis thaliana NP_001044345 Oryza sativa Japonica Group NP_001044467 Oryza sativa Japonica Group NP_001055967 Oryza sativa Japonica Group NP_001060084 Oryza sativa Japonica Group NP_001060085 Oryza sativa Japonica Group NP_001060163 Oryza sativa Japonica Group estExt_Genewise1.C_3230045 Physcomitrella patens subsp. patens 27533.m000079 Ricinus communis 28152.m000872 Ricinus communis 29970.m001008 Ricinus communis 30128.m008575 Ricinus communis 30129.m000366 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31901 1.2E-247 1 466 No hit NA Pfam PF03321 3.8E-157 1 440 IPR004993 GH3 auxin-responsive promoter
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytoplasm and nucleus Evidence Localization with GFP-ORF fusion protein (GFP:cDNA) Pubmed ID 15610358
Localization 3 Localization cytosol Evidence SUBAcon Pubmed ID 23180787