Basic information
Locus name	AT1G27170
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	ATP binding / protein binding / transmembrane receptor; FUNCTIONS IN: protein binding, transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process defense response molecular function ADP binding
Sequence	AT1G27170.1 | Genomic | mRNA | CDS | Protein AT1G27170.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G27170.1  miRNA: ath-miR4221 miRNA: ath-miR4221 mfe: -30.2 kcal/mol  p-value: 0.006258  position: 1889  target 5' A      U  C             G  3'             GUAAGA UU CAGCAGAGGAAAA                 CGUUCU AA GUUGUCUCCUUUU      miRNA  3'        U                   5'  target: AT1G27170.2  miRNA: ath-miR4221 miRNA: ath-miR4221 mfe: -30.2 kcal/mol  p-value: 0.006146  position: 1819  target 5' A      U  C             G  3'             GUAAGA UU CAGCAGAGGAAAA                 CGUUCU AA GUUGUCUCCUUUU      miRNA  3'        U                   5'
Ortholog Group
Ortholog Groups: OG5_160079	Accession Taxon NP_001154372 ( AT1G27170 ) Arabidopsis thaliana NP_174037 Arabidopsis thaliana NP_174038 Arabidopsis thaliana e_gw1.162.86.1 Physcomitrella patens subsp. patens 29736.m002081 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11017 1.2E-172 7 878 No hit NA SUPERFAMILY SSF52200 1.4E-34 9 155 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain SUPERFAMILY SSF52200 4.3E-31 10 155 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain ProSiteProfiles PS50104 32.0 12 152 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain SMART SM00255 3.0E-46 13 152 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain ProSiteProfiles PS50104 27.3 14 152 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain PANTHER PTHR32062 5.0E-104 15 860 No hit NA SMART SM00255 5.9E-31 15 152 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Pfam PF01582 5.1E-25 16 146 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Pfam PF01582 8.9E-21 18 147 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain SUPERFAMILY SSF52540 4.3E-58 186 442 IPR027417 P-loop containing nucleoside triphosphate hydrolase SUPERFAMILY SSF52540 4.3E-58 186 442 IPR027417 P-loop containing nucleoside triphosphate hydrolase Pfam PF00931 5.5E-47 206 465 IPR002182 NB-ARC Pfam PF00931 5.5E-47 206 465 IPR002182 NB-ARC PRINTS PR00364 7.1E-20 213 228 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 213 228 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 289 303 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 289 303 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 382 396 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 382 396 IPR000767 Disease resistance protein SUPERFAMILY SSF46785 1.3E-7 420 526 No hit NA SUPERFAMILY SSF46785 1.3E-7 420 526 No hit NA SUPERFAMILY SSF52058 3.4E-48 591 941 No hit NA SUPERFAMILY SSF52058 3.4E-48 591 941 No hit NA PRINTS PR00364 7.1E-20 714 730 IPR000767 Disease resistance protein PRINTS PR00364 7.1E-20 714 730 IPR000767 Disease resistance protein SMART SM00369 89.0 764 786 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 89.0 764 786 IPR003591 Leucine-rich repeat, typical subtype Pfam PF13855 6.5E-7 765 822 No hit NA Pfam PF13855 6.5E-7 765 822 No hit NA SMART SM00369 42.0 787 808 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 42.0 787 808 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 5.4 810 833 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 5.4 810 833 IPR003591 Leucine-rich repeat, typical subtype SUPERFAMILY SSF52058 2.7E-45 893 1218 No hit NA SUPERFAMILY SSF52058 2.7E-45 893 1218 No hit NA SMART SM00369 18.0 904 927 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 18.0 904 927 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 170.0 951 974 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 170.0 951 974 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 190.0 998 1020 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 190.0 998 1020 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 15.0 1085 1108 IPR003591 Leucine-rich repeat, typical subtype SMART SM00369 15.0 1085 1108 IPR003591 Leucine-rich repeat, typical subtype
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787