Basic information
Locus name	AT1G25520
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component membrane
Sequence	AT1G25520.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_128045	Accession Taxon NP_173923 ( AT1G25520 ) Arabidopsis thaliana NP_177032 Arabidopsis thaliana NP_568535 Arabidopsis thaliana NP_851098 Arabidopsis thaliana CMS279C Cyanidioschyzon merolae strain 10D 194510 Chlamydomonas reinhardtii ACO63364 Micromonas sp. RCC299 ACO66069 Micromonas sp. RCC299 NP_001061871 Oryza sativa Japonica Group NP_001062312 Oryza sativa Japonica Group NP_001067880 Oryza sativa Japonica Group 0500010282 Ostreococcus tauri e_gw1.04.00.357.1 Ostreococcus tauri e_gw1.130.60.1 Physcomitrella patens subsp. patens e_gw1.184.46.1 Physcomitrella patens subsp. patens gw1.73.137.1 Physcomitrella patens subsp. patens 28883.m000744 Ricinus communis 29929.m004593 Ricinus communis e_gw1.11a.113.1 Thalassiosira pseudonana CCMP1335 XP_002956571 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12608 3.8E-106 3 229 IPR001727 Uncharacterised protein family UPF0016 Pfam PF01169 1.4E-22 8 83 IPR001727 Uncharacterised protein family UPF0016 Pfam PF01169 2.2E-22 145 220 IPR001727 Uncharacterised protein family UPF0016