Basic information
Locus name	AT1G24620
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction (calcium)
Effect for Senescence	unclear
Gene Description	Polcalcin, putative / calcium-binding pollen allergen, putative; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function calcium ion binding
Sequence	AT1G24620.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_138761	Accession Taxon NP_173866 ( AT1G24620 ) Arabidopsis thaliana NP_198593 Arabidopsis thaliana NP_564874 Arabidopsis thaliana NP_001045400 Oryza sativa Japonica Group NP_001055397 Oryza sativa Japonica Group e_gw1.103.41.1 Physcomitrella patens subsp. patens e_gw1.107.250.1 Physcomitrella patens subsp. patens e_gw1.131.108.1 Physcomitrella patens subsp. patens e_gw1.4.159.1 Physcomitrella patens subsp. patens e_gw1.77.63.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1680052 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_1000466 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_56000070 Physcomitrella patens subsp. patens gw1.107.104.1 Physcomitrella patens subsp. patens gw1.263.82.1 Physcomitrella patens subsp. patens 28609.m000203 Ricinus communis 29673.m000941 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10891 2.1E-117 32 181 No hit NA SUPERFAMILY SSF47473 4.0E-46 32 173 No hit NA ProSiteProfiles PS50222 16.4 33 68 IPR002048 EF-hand domain SMART SM00054 1.9E-7 37 65 IPR002048 EF-hand domain Pfam PF13499 9.8E-14 38 96 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 46 58 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 12.8 69 104 IPR002048 EF-hand domain SMART SM00054 0.0 73 101 IPR002048 EF-hand domain ProSiteProfiles PS50222 15.4 106 141 IPR002048 EF-hand domain SMART SM00054 1.0E-5 110 138 IPR002048 EF-hand domain Pfam PF13499 1.7E-13 111 171 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 119 131 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 13.0 142 177 IPR002048 EF-hand domain SMART SM00054 3.7E-6 146 174 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 155 167 IPR018247 EF-Hand 1, calcium-binding site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787