Basic information
GenBank ID	AF031241
Alias	soyBiPD
Organism	Soybean (Glycine max)
Taxonomic identifier	[NCBI]
Function category	Signal transduction:molecular chaperone
Effect for Senescence	delay
Gene Description	The ER-resident molecular chaperone BiP (binding protein).
Evidence	Genetic evidence:Transgene [Ref 1]
References	1: Valente MA, Faria JA, Soares-Ramos JR, Reis PA, Pinheiro GL, Piovesan ND, Morais AT, Menezes CC, Cano MA, Fietto LG, Loureiro ME, Arag_o FJ, Fontes EP The ER luminal binding protein (BiP) mediates an increase in drought tolerance in soybean and delays drought-induced leaf senescence in soybean and tobacco. J. Exp. Bot. 2009;60(2):533-46
Sequence	AF031241.1 | mRNA | CDS | Protein
Mutant information
Mutant name	35S::BiP
Mutant/Transgenic	transgenic
Ecotype	soybean (Glycine max cv. Conquista)
Mutagenesis type	transgene
miRNA Interaction
Details	target: AF031241  miRNA: gma-miR2109 miRNA: gma-miR2109 mfe: -27.7 kcal/mol  p-value: 0.043746  position:  809  target 5' U            U  G  C 3'             GGAGGUGAGGAC UU GU              UCUCCGCUUCUG GA CG   miRNA  3' G            U  G  U 5'  target: AF031241  miRNA: gma-miR396a miRNA: gma-miR396a mfe: -25.6 kcal/mol  p-value: 0.031507  position:  1071  target 5' C     G         A     G 3'             CAG U AAGAAGGCU UGGAA              GUC A UUCUUUCGA ACCUU   miRNA  3'     A G         C       5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51257 5.0 1 20 No hit NA PANTHER PTHR19375 0.0 6 657 No hit NA SUPERFAMILY SSF53067 5.5E-71 35 219 No hit NA PRINTS PR00301 8.9E-83 36 49 IPR013126 Heat shock protein 70 family Pfam PF00012 4.9E-266 37 644 IPR013126 Heat shock protein 70 family ProSitePatterns PS00297 NA 40 47 IPR018181 Heat shock protein 70, conserved site PRINTS PR00301 8.9E-83 64 76 IPR013126 Heat shock protein 70 family PRINTS PR00301 8.9E-83 86 94 IPR013126 Heat shock protein 70 family PRINTS PR00301 8.9E-83 174 194 IPR013126 Heat shock protein 70 family SUPERFAMILY SSF53067 9.9E-66 222 412 No hit NA ProSitePatterns PS00329 NA 228 241 IPR018181 Heat shock protein 70, conserved site PRINTS PR00301 8.9E-83 234 244 IPR013126 Heat shock protein 70 family Coils Coil NA 284 305 No hit NA PRINTS PR00301 8.9E-83 362 378 IPR013126 Heat shock protein 70 family ProSitePatterns PS01036 NA 365 379 IPR018181 Heat shock protein 70, conserved site PRINTS PR00301 8.9E-83 394 414 IPR013126 Heat shock protein 70 family SUPERFAMILY SSF100920 8.1E-64 417 574 No hit NA PRINTS PR00301 8.9E-83 421 440 IPR013126 Heat shock protein 70 family PRINTS PR00301 8.9E-83 502 518 IPR013126 Heat shock protein 70 family SUPERFAMILY SSF100934 4.1E-28 568 651 No hit NA Coils Coil NA 580 601 No hit NA Coils Coil NA 614 635 No hit NA