Basic information
Locus name	AT4G25470
Alias	CBF2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:DREB subfamily A-1 of ERF/AP2
Effect for Senescence	delay
Gene Description	Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2).
Evidence	Genetic evidence:Transgene [Ref 1]
References	1: Sharabi-Schwager M, Lers A, Samach A, Guy CL, Porat R Overexpression of the CBF2 transcriptional activator in Arabidopsis delays leaf senescence and extends plant longevity. J. Exp. Bot. 2010;61(1):261-73
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity
Sequence	AT4G25470.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	CBF2OE
Mutant/Transgenic	transgenic
Ecotype	Ws-2
Mutagenesis type	transgene
miRNA Interaction
Details	target: AT4G25470.1  miRNA: ath-miR829 miRNA: ath-miR829 mfe: -28.8 kcal/mol  p-value: 0.000965  position:  799  target 5' U                  U    U 3'             UUCCAUU UUUGGUAUUA AGCU              AAGGUAG AAACCAUAGU UCGA   miRNA  3' U       U          C      5'
Ortholog Group
Ortholog Groups: OG5_143059	Accession Taxon NP_001077764 Arabidopsis thaliana NP_172721 Arabidopsis thaliana NP_176491 Arabidopsis thaliana NP_200012 Arabidopsis thaliana NP_567719 ( AT4G25470 ) Arabidopsis thaliana NP_567720 Arabidopsis thaliana NP_567721 Arabidopsis thaliana NP_001047727 Oryza sativa Japonica Group NP_001053608 Oryza sativa Japonica Group NP_001056661 Oryza sativa Japonica Group 30147.m014313 Ricinus communis 30190.m011119 Ricinus communis 30190.m011120 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31839 4.1E-103 1 216 No hit NA Pfam PF00847 2.6E-15 50 99 IPR001471 AP2/ERF domain ProSiteProfiles PS51032 22.0 50 107 IPR001471 AP2/ERF domain SMART SM00380 7.1E-33 50 113 IPR001471 AP2/ERF domain SUPERFAMILY SSF54171 1.1E-21 50 109 IPR016177 DNA-binding, integrase-type PRINTS PR00367 1.1E-9 51 62 IPR001471 AP2/ERF domain PRINTS PR00367 1.1E-9 73 89 IPR001471 AP2/ERF domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787