Basic information
Locus name	AT1G20440
Alias	COR47
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Environmental factors(Cold)
Effect for Senescence	unclear
Gene Description	COLD-REGULATED 47 (COR47)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process response to stress response to water stimulus
Sequence	AT1G20440.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_156400	Accession Taxon NP_173468 ( AT1G20440 ) Arabidopsis thaliana NP_177745 Arabidopsis thaliana NP_564114 Arabidopsis thaliana NP_850947 Arabidopsis thaliana NP_001047689 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_4210010 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_4420010 Physcomitrella patens subsp. patens 30170.m014323 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF00257 6.4E-14 43 157 IPR000167 Dehydrin Coils Coil NA 69 104 No hit NA ProSitePatterns PS00315 NA 111 128 IPR000167 Dehydrin ProSitePatterns PS00823 NA 142 149 IPR000167 Dehydrin Pfam PF00257 2.7E-16 170 247 IPR000167 Dehydrin ProSitePatterns PS00823 NA 189 196 IPR000167 Dehydrin ProSitePatterns PS00823 NA 240 247 IPR000167 Dehydrin
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787