Leaf Senescence DataBase

Basic information

Locus name

AT1G19660

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Others

Effect for Senescence

unclear

Gene Description

wound-responsive family protein; INVOLVED IN: response to wounding

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

molecular function

Sequence

Ortholog Group

Ortholog Groups: OG5_141277

Accession	Taxon
NP_001031068 ( AT1G19660 )	Arabidopsis thaliana
NP_177671	Arabidopsis thaliana
NP_564093	Arabidopsis thaliana
NP_849890	Arabidopsis thaliana
NP_849891	Arabidopsis thaliana
NP_001061624	Oryza sativa Japonica Group
e_gw1.122.29.1	Physcomitrella patens subsp. patens
e_gw1.21.96.1	Physcomitrella patens subsp. patens
e_gw1.65.99.1	Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_84000077	Physcomitrella patens subsp. patens
gw1.101.184.1	Physcomitrella patens subsp. patens
gw1.192.20.1	Physcomitrella patens subsp. patens
gw1.34.168.1	Physcomitrella patens subsp. patens
30170.m014084	Ricinus communis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProSiteProfiles	PS51658	33.8	121	256	IPR003729	Bifunctional nuclease domain
SUPERFAMILY	SSF103256	2.4E-36	121	259	IPR003729	Bifunctional nuclease domain
Pfam	PF02577	1.5E-19	138	250	IPR003729	Bifunctional nuclease domain
Pfam	PF02151	1.0E-5	293	321	IPR001943	UVR domain

Subcellular Localization

Localization 1
	Localization	plastid
	Evidence	Localization with GFP-fusion protein (GFP:cDNA)
	Pubmed ID	10737809