Basic information
Locus name	AT5G66360
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	ribosomal RNA adenine dimethylase family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process rRNA modification molecular function rRNA (adenine-N6,N6-)-dimethyltransferase activity rRNA methyltransferase activity
Sequence	AT5G66360.1 | Genomic | mRNA | CDS | Protein AT5G66360.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126745	Accession Taxon NP_171690 Arabidopsis thaliana NP_182264 Arabidopsis thaliana NP_201437 Arabidopsis thaliana NP_975003 ( AT5G66360 ) Arabidopsis thaliana CME165C Cyanidioschyzon merolae strain 10D CMR129C Cyanidioschyzon merolae strain 10D 169993 Chlamydomonas reinhardtii 206075 Chlamydomonas reinhardtii ACO67301 Micromonas sp. RCC299 ACO69576 Micromonas sp. RCC299 NP_001045730 Oryza sativa Japonica Group NP_001059748 Oryza sativa Japonica Group NP_001064257 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_08.0001000036 Ostreococcus tauri gw1.09.00.341.1 Ostreococcus tauri e_gw1.112.81.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_320139 Physcomitrella patens subsp. patens 28883.m000730 Ricinus communis 29634.m002056 Ricinus communis 30174.m009159 Ricinus communis estExt_Genewise1.C_chr_50305 Thalassiosira pseudonana CCMP1335 gw1.7.183.1 Thalassiosira pseudonana CCMP1335 XP_002947017 Volvox carteri f. nagariensis XP_002953877 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51609 33.0 1 352 IPR025814 18S rRNA dimethylase DIM1 PANTHER PTHR11727 2.4E-76 16 343 IPR001737 Ribosomal RNA adenine methylase transferase SUPERFAMILY SSF53335 2.1E-50 59 252 No hit NA Pfam PF00398 6.7E-40 65 213 IPR001737 Ribosomal RNA adenine methylase transferase SMART SM00650 5.4E-53 77 218 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal ProSitePatterns PS01131 NA 93 120 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787