|
Locus name | AT5G52300 |
Alias | RD29B |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Environmental factors |
Effect for Senescence | delay |
Gene Description | encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. |
Evidence | Genetic evidence:Transgene [Ref 1] |
References | 1: Yang SD, Seo PJ, Yoon HK, Park CMThe Arabidopsis NAC transcription factor VNI2 integrates abscisic acid signals into leaf senescence via the COR/RD genes.Plant Cell 2011 Jun;23(6):2155-68 |
Sequence | AT5G52300.1 | Genomic | mRNA | CDS | Protein AT5G52300.2 | Genomic | mRNA | CDS | Protein
|
|
Mutant name |
35S:RD29B |
Mutant/Transgenic |
transgenic |
Ecotype |
Col-0 |
Mutagenesis type |
transgene |
miRNA Interaction | |
|
Details | | target: AT5G52300.1 miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.3 kcal/mol p-value: 0.001012
position: 338 target 5' A U C 3' GAUGAUGAUGAUGAG AUGA CUGCUACUACUACUU UACU miRNA 3' A C 5'
target: AT5G52300.2 miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.3 kcal/mol p-value: 0.001011
position: 335 target 5' A U C 3' GAUGAUGAUGAUGAG AUGA CUGCUACUACUACUU UACU miRNA 3' A C 5'
|
|
Ortholog Group | |
|
Ortholog Groups: OG5_164276 | |
Cross Link | |
|
|