Basic information
Locus name	AT1G11720
Alias	ATSS3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	starch synthase 3 (ATSS3); FUNCTIONS IN: transferase activity, transferring glycosyl groups, starch synthase activity; INVOLVED IN: starch biosynthetic process. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process biosynthetic process glucan biosynthetic process molecular function starch binding starch synthase activity
Pathway	KEGG map00500 (EC 2.4.1.21) MetaCyc PWY-622
Sequence	AT1G11720.1 | Genomic | mRNA | CDS | Protein AT1G11720.2 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 110 131 No hit NA Pfam PF03423 1.1E-27 153 237 IPR005085 Carbohydrate binding module family 25 SMART SM01066 2.9E-31 153 238 IPR005085 Carbohydrate binding module family 25 Coils Coil NA 247 301 No hit NA Pfam PF03423 2.0E-28 328 423 IPR005085 Carbohydrate binding module family 25 SMART SM01066 3.4E-34 328 424 IPR005085 Carbohydrate binding module family 25 Pfam PF03423 2.3E-26 495 584 IPR005085 Carbohydrate binding module family 25 SMART SM01066 3.6E-36 495 585 IPR005085 Carbohydrate binding module family 25 PANTHER PTHR12526 3.8E-166 533 1040 No hit NA Hamap MF_00484 33.3 594 1040 IPR011835 Glycogen/starch synthase, ADP-glucose type SUPERFAMILY SSF53756 2.0E-92 594 1042 No hit NA Pfam PF08323 4.8E-51 595 785 IPR013534 Starch synthase, catalytic domain Pfam PF00534 9.0E-8 844 967 IPR001296 Glycosyl transferase, family 1
Subcellular Localization
Localization	plastid
Evidence	SUBAcon
Pubmed ID	23180787