Basic information
Locus name	AT1G08820
Alias	VAP27-2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2 (VAP27-2); FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular transport. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function structural molecule activity
Sequence	AT1G08820.1 | Genomic | mRNA | CDS | Protein AT1G08820.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_169450	Accession Taxon NP_001031004 ( AT1G08820 ) Arabidopsis thaliana NP_172359 Arabidopsis thaliana NP_001045329 Oryza sativa Japonica Group NP_001055365 Oryza sativa Japonica Group 30128.m008669 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10809 8.1E-92 1 384 No hit NA ProSiteProfiles PS50202 29.4 5 125 IPR000535 Major sperm protein SUPERFAMILY SSF49354 3.7E-40 5 133 IPR008962 PapD-like Pfam PF00635 5.8E-31 6 109 IPR000535 Major sperm protein Coils Coil NA 300 335 No hit NA
Subcellular Localization
Localization 1 Localization ER Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytosol Evidence SUBAcon Pubmed ID 23180787