Basic information
Locus name	AT1G07590
Alias	PPR
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction (cadmium)
Effect for Senescence	unclear
Gene Description	pentatricopeptide (PPR) repeat-containing protein; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT1G07590.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_211875	Accession Taxon NP_172238 ( AT1G07590 ) Arabidopsis thaliana 29977.m000259 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24015 3.8E-51 104 526 No hit NA ProSiteProfiles PS51375 8.6 165 199 IPR002885 Pentatricopeptide repeat Pfam PF01535 0.2 169 196 IPR002885 Pentatricopeptide repeat ProSiteProfiles PS51375 8.7 235 269 IPR002885 Pentatricopeptide repeat Pfam PF13812 0.1 237 269 IPR002885 Pentatricopeptide repeat ProSiteProfiles PS51375 7.0 339 369 IPR002885 Pentatricopeptide repeat Pfam PF01535 0.1 349 367 IPR002885 Pentatricopeptide repeat ProSiteProfiles PS51375 12.0 374 408 IPR002885 Pentatricopeptide repeat Pfam PF13041 3.5E-10 378 422 IPR002885 Pentatricopeptide repeat TIGRFAM TIGR00756 8.7E-9 378 410 IPR002885 Pentatricopeptide repeat ProSiteProfiles PS51375 5.4 409 443 IPR002885 Pentatricopeptide repeat ProSiteProfiles PS51375 6.5 451 485 IPR002885 Pentatricopeptide repeat Pfam PF01535 0.3 457 479 IPR002885 Pentatricopeptide repeat
Subcellular Localization
Localization	mitochondrion
Evidence	SUBAcon
Pubmed ID	23180787