Basic information
Locus name	AT1G05570
Alias	CALS1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	CALLOSE SYNTHASE 1 (CALS1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process (1->3)-beta-D-glucan biosynthetic process cellular component 1,3-beta-D-glucan synthase complex molecular function 1,3-beta-D-glucan synthase activity
Pathway	KEGG map00500 (EC 2.4.1.34)
Sequence	AT1G05570.1 | Genomic | mRNA | CDS | Protein AT1G05570.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G05570.1  miRNA: ath-miR5647 miRNA: ath-miR5647 mfe: -30.2 kcal/mol  p-value: 0.005621  position: 2341  target 5' A             C   C   U  3'             GGAGUCGUCAUCG GCU UGG                 CCUUAGCAGUAGU UGA ACU      miRNA  3' A             U          5'  target: AT1G05570.2  miRNA: ath-miR5647 miRNA: ath-miR5647 mfe: -30.2 kcal/mol  p-value: 0.005516  position: 2218  target 5' A             C   C   U  3'             GGAGUCGUCAUCG GCU UGG                 CCUUAGCAGUAGU UGA ACU      miRNA  3' A             U          5'
Ortholog Group
Ortholog Groups: OG5_127693	Accession Taxon NP_001154712 Arabidopsis thaliana NP_172136 Arabidopsis thaliana NP_187372 Arabidopsis thaliana NP_188075 Arabidopsis thaliana NP_191469 Arabidopsis thaliana NP_192264 Arabidopsis thaliana NP_196804 Arabidopsis thaliana NP_198503 Arabidopsis thaliana NP_563743 ( AT1G05570 ) Arabidopsis thaliana NP_567278 Arabidopsis thaliana NP_849953 Arabidopsis thaliana NP_850178 Arabidopsis thaliana NP_850271 Arabidopsis thaliana 143511 Chlamydomonas reinhardtii 147445 Chlamydomonas reinhardtii 147446 Chlamydomonas reinhardtii ACO61306 Micromonas sp. RCC299 NP_001043251 Oryza sativa Japonica Group NP_001043253 Oryza sativa Japonica Group NP_001043829 Oryza sativa Japonica Group NP_001044278 Oryza sativa Japonica Group NP_001048627 Oryza sativa Japonica Group NP_001048628 Oryza sativa Japonica Group NP_001048779 Oryza sativa Japonica Group NP_001048837 Oryza sativa Japonica Group NP_001056596 Oryza sativa Japonica Group NP_001056983 Oryza sativa Japonica Group NP_001058646 Oryza sativa Japonica Group e_gw1.07.00.35.1 Ostreococcus tauri e_gw1.13.32.1 Physcomitrella patens subsp. patens e_gw1.160.55.1 Physcomitrella patens subsp. patens e_gw1.18.9.1 Physcomitrella patens subsp. patens e_gw1.199.78.1 Physcomitrella patens subsp. patens e_gw1.67.119.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_400112 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_130334 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1450031 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3790031 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_660051 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_670134 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_880098 Physcomitrella patens subsp. patens 28035.m000358 Ricinus communis 28035.m000359 Ricinus communis 29691.m000282 Ricinus communis 29734.m000419 Ricinus communis 29759.m000281 Ricinus communis 29851.m002416 Ricinus communis 29983.m003191 Ricinus communis 29983.m003192 Ricinus communis 30147.m013812 Ricinus communis 30226.m002023 Ricinus communis gw1.15.13.1 Thalassiosira pseudonana CCMP1335 XP_002946730 Volvox carteri f. nagariensis XP_002946743 Volvox carteri f. nagariensis XP_002949299 Volvox carteri f. nagariensis XP_002950451 Volvox carteri f. nagariensis XP_002950452 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12741 0.0 1 1886 No hit NA Pfam PF04652 1.8E-9 42 159 No hit NA Pfam PF14288 1.6E-41 316 431 IPR026899 1,3-beta-glucan synthase subunit FKS1-like, domain-1 Pfam PF02364 4.3E-206 1007 1743 IPR003440 Glycosyl transferase, family 48 Coils Coil NA 1084 1105 No hit NA
Subcellular Localization
Localization 1 Localization other cytoplasmic components Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytosol Evidence SUBAcon Pubmed ID 23180787